PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22054
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 199aa    MW: 20897.4 Da    PI: 10.0364
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22054genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31128186259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D ++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp+++++tYegeH+h+
  EMT22054 128 ADDFSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPSDPSMLIVTYEGEHRHT 186
               699***********************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105337.0E-1876124IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.807.0E-33114186IPR003657WRKY domain
PROSITE profilePS5081130.32122188IPR003657WRKY domain
SuperFamilySSF1182902.48E-26124186IPR003657WRKY domain
SMARTSM007749.2E-37127187IPR003657WRKY domain
PfamPF031061.8E-26129185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MTLDFTKASS GYGNDAGFSV SAASSSFMSS VTGDGSVSNG RGGGSSLMLP PPPSASCGKP  60
PLASSAASTG AGGGQKRKCH DHAHSENVAG GKYGASGGRC HCSKRRKSRV RRMTRVPAIS  120
SKAAEIPADD FSWRKYGQKP IKGSPYPRGY YKCSTVRGCP ARKHVERDPS DPSMLIVTYE  180
GEHRHTPADQ EPLAPLPEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-21114185171WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX2770540.0JX277054.1 Triticum aestivum WRKY51 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001142073.11e-95uncharacterized protein LOC100274230
SwissprotQ9SV152e-67WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLM8BJA91e-144M8BJA9_AEGTA; Putative WRKY transcription factor 11
TrEMBLW5ARM71e-143W5ARM7_WHEAT; Uncharacterized protein
STRINGMLOC_63184.11e-113(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-42WRKY DNA-binding protein 11